Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
GFI1Q99684 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.52□□□□□ -0.25
GFI1Q99684 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GFI1Q99684 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
GFI1Q99684 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.52□□□□□ -0.25
GFI1Q99684 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GFI1Q99684 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.52□□□□□ -0.25
GFI1Q99684 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GFI1Q99684 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GFI1Q99684 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GFI1Q99684 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.52□□□□□ -0.25
GFI1Q99684 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
GFI1Q99684 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GFI1Q99684 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GFI1Q99684 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.51□□□□□ -0.25
GFI1Q99684 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 GHSR-202ENST00000427970 912 ntBASIC13.51□□□□□ -0.25
GFI1Q99684 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.51□□□□□ -0.25
GFI1Q99684 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC13.51□□□□□ -0.25
GFI1Q99684 AC064836.3-201ENST00000607928 673 ntBASIC13.51□□□□□ -0.25
GFI1Q99684 Z83851.2-201ENST00000609564 659 ntBASIC13.51□□□□□ -0.25
GFI1Q99684 AL031008.1-201ENST00000619963 541 ntBASIC13.51□□□□□ -0.25
GFI1Q99684 AC008267.7-201ENST00000624570 1194 ntBASIC13.51□□□□□ -0.25
GFI1Q99684 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
GFI1Q99684 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 INTS4P1-203ENST00000641008 3683 ntBASIC13.51□□□□□ -0.25
GFI1Q99684 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
GFI1Q99684 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GFI1Q99684 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GFI1Q99684 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.5□□□□□ -0.25
GFI1Q99684 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.5□□□□□ -0.25
GFI1Q99684 AC074386.1-202ENST00000463561 864 ntBASIC13.5□□□□□ -0.25
GFI1Q99684 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC13.5□□□□□ -0.25
GFI1Q99684 PDPK2P-202ENST00000562415 1191 ntBASIC13.5□□□□□ -0.25
GFI1Q99684 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 AC104692.2-201ENST00000603054 253 ntBASIC13.5□□□□□ -0.25
GFI1Q99684 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
GFI1Q99684 AL513190.1-201ENST00000621254 727 ntBASIC13.5□□□□□ -0.25
GFI1Q99684 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
GFI1Q99684 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms