Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL390755.1-201ENST00000623716 2027 ntBASIC14.37□□□□□ -0.11
SNX18Q96RF0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 CEND1P1-201ENST00000451006 455 ntBASIC14.37□□□□□ -0.11
SNX18Q96RF0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 YBX1P5-201ENST00000509441 847 ntBASIC14.37□□□□□ -0.11
SNX18Q96RF0 FAM86C2P-203ENST00000528684 1004 ntBASIC14.37□□□□□ -0.11
SNX18Q96RF0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 AC027796.2-201ENST00000575326 344 ntBASIC14.37□□□□□ -0.11
SNX18Q96RF0 AC008267.7-201ENST00000624570 1194 ntBASIC14.37□□□□□ -0.11
SNX18Q96RF0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SNX18Q96RF0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SNX18Q96RF0 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.36□□□□□ -0.11
SNX18Q96RF0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.36□□□□□ -0.11
SNX18Q96RF0 MIR600HG-201ENST00000449175 5984 ntBASIC14.36□□□□□ -0.11
SNX18Q96RF0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 KRT18P28-201ENST00000453838 1332 ntBASIC14.36□□□□□ -0.11
SNX18Q96RF0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SNX18Q96RF0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.36□□□□□ -0.11
SNX18Q96RF0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 LINC00552-201ENST00000625151 2579 ntBASIC14.35□□□□□ -0.11
SNX18Q96RF0 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
SNX18Q96RF0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SNX18Q96RF0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms