Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 AC103691.2-201ENST00000618824 433 ntBASIC13.1□□□□□ -0.31
CSMD1Q96PZ7 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 AC138466.4-201ENST00000623965 852 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CICP6-201ENST00000457191 2729 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 ACTBP7-201ENST00000418351 1124 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 AP002803.1-201ENST00000528836 498 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 MIR5196-201ENST00000578146 115 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 PCDHA1-201ENST00000378133 2726 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 RPS15-201ENST00000233609 534 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 AL008707.1-201ENST00000422498 534 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 RPS15-205ENST00000586686 562 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 RPS15-208ENST00000591804 711 ntTSL 5 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 AC012044.1-201ENST00000603431 297 ntBASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.09□□□□□ -0.31
CSMD1Q96PZ7 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.31
CSMD1Q96PZ7 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD1Q96PZ7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CSMD1Q96PZ7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
CSMD1Q96PZ7 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.08□□□□□ -0.31
CSMD1Q96PZ7 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC016396.2-201ENST00000562575 1417 ntBASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC074138.1-201ENST00000611182 1303 ntBASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AL354877.1-201ENST00000424412 413 ntBASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AC006158.1-201ENST00000610661 249 ntBASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 AL161773.1-201ENST00000624845 863 ntBASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CSMD1Q96PZ7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms