Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.75■□□□□ 0.43
SYNGAP1Q96PV0 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AL133267.1-201ENST00000398220 340 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AC108725.1-201ENST00000495472 409 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 DUX4L45-201ENST00000566406 1057 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AC008687.7-202ENST00000637404 953 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AC011477.6-201ENST00000604980 1927 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AL162727.3-201ENST00000635661 2787 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 AL139384.1-201ENST00000612143 3047 ntBASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNGAP1Q96PV0 CICP6-201ENST00000457191 2729 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 BCYRN1-201ENST00000418539 200 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC026954.1-201ENST00000429771 1293 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 C2orf27AP3-201ENST00000434123 579 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 PFN1P12-201ENST00000455938 534 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC015910.1-201ENST00000579400 975 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC010328.2-201ENST00000597698 1111 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC107373.2-201ENST00000607735 490 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AL354718.3-201ENST00000616414 581 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CR382287.1-201ENST00000623954 586 ntBASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
SYNGAP1Q96PV0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms