Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AL133267.1-201ENST00000398220 340 ntBASIC16.14■□□□□ 0.17
RPRD1AQ96P16 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AC025048.6-201ENST00000634326 1161 ntBASIC16.14■□□□□ 0.17
RPRD1AQ96P16 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 AC092850.2-201ENST00000623821 2697 ntBASIC16.14■□□□□ 0.17
RPRD1AQ96P16 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPRD1AQ96P16 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 FAM86LP-201ENST00000478302 853 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 WASH4P-201ENST00000564273 1246 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 AC015910.1-201ENST00000579400 975 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 MIR8072-201ENST00000614241 80 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 NORAD-201ENST00000565493 5339 ntBASIC16.13■□□□□ 0.17
RPRD1AQ96P16 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.13■□□□□ 0.17
RPRD1AQ96P16 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 DGCR5-201ENST00000399539 862 ntBASIC16.12■□□□□ 0.17
RPRD1AQ96P16 AC098850.1-201ENST00000419919 790 ntBASIC16.12■□□□□ 0.17
RPRD1AQ96P16 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 AP005018.1-201ENST00000525475 301 ntBASIC16.12■□□□□ 0.17
RPRD1AQ96P16 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 AC105233.6-201ENST00000642093 218 ntBASIC16.12■□□□□ 0.17
RPRD1AQ96P16 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.12■□□□□ 0.17
RPRD1AQ96P16 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms