Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SNX27Q96L92 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.84■□□□□ 0.29
SNX27Q96L92 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNX27Q96L92 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNX27Q96L92 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNX27Q96L92 CICP13-201ENST00000422015 2789 ntBASIC16.83■□□□□ 0.29
SNX27Q96L92 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
SNX27Q96L92 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SNX27Q96L92 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SNX27Q96L92 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SNX27Q96L92 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 ACTG1P3-201ENST00000431775 1114 ntBASIC16.83■□□□□ 0.28
SNX27Q96L92 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 USP32P1-208ENST00000506594 1164 ntBASIC16.83■□□□□ 0.28
SNX27Q96L92 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 CLUHP6-201ENST00000580789 941 ntBASIC16.83■□□□□ 0.28
SNX27Q96L92 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 AC025181.2-201ENST00000606994 802 ntBASIC16.83■□□□□ 0.28
SNX27Q96L92 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 AC005252.2-201ENST00000624630 1141 ntBASIC16.83■□□□□ 0.28
SNX27Q96L92 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
SNX27Q96L92 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNX27Q96L92 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SNX27Q96L92 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SNX27Q96L92 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SNX27Q96L92 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX27Q96L92 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
SNX27Q96L92 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX27Q96L92 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.82■□□□□ 0.28
SNX27Q96L92 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.82■□□□□ 0.28
SNX27Q96L92 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX27Q96L92 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.82■□□□□ 0.28
SNX27Q96L92 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.82■□□□□ 0.28
SNX27Q96L92 GPR39-203ENST00000622084 900 ntTSL 5 BASIC16.82■□□□□ 0.28
SNX27Q96L92 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SNX27Q96L92 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms