Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SHDQ96IW2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.66■□□□□ 0.1
SHDQ96IW2 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SHDQ96IW2 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.66■□□□□ 0.1
SHDQ96IW2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.66■□□□□ 0.1
SHDQ96IW2 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.66■□□□□ 0.1
SHDQ96IW2 ME2P1-201ENST00000426028 1970 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.66■□□□□ 0.1
SHDQ96IW2 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC15.66■□□□□ 0.1
SHDQ96IW2 AC104457.1-201ENST00000401024 814 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 AL139094.1-201ENST00000405549 1188 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SHDQ96IW2 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.66■□□□□ 0.1
SHDQ96IW2 AC021723.1-201ENST00000486306 515 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 AC004066.1-201ENST00000502488 802 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 AC106794.1-201ENST00000506935 792 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.66■□□□□ 0.1
SHDQ96IW2 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
SHDQ96IW2 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.66■□□□□ 0.1
SHDQ96IW2 RN7SL774P-201ENST00000577467 290 ntBASIC15.66■□□□□ 0.1
SHDQ96IW2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.66■□□□□ 0.1
SHDQ96IW2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SHDQ96IW2 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SHDQ96IW2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.66■□□□□ 0.1
SHDQ96IW2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.66■□□□□ 0.1
SHDQ96IW2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC018892.3-201ENST00000623986 2499 ntBASIC15.65■□□□□ 0.1
SHDQ96IW2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHDQ96IW2 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC15.65■□□□□ 0.1
SHDQ96IW2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
SHDQ96IW2 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 FGFR3P5-201ENST00000564496 886 ntBASIC15.65■□□□□ 0.1
SHDQ96IW2 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SHDQ96IW2 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SHDQ96IW2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SHDQ96IW2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.65■□□□□ 0.1
SHDQ96IW2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.65■□□□□ 0.1
SHDQ96IW2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.65■□□□□ 0.1
SHDQ96IW2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SHDQ96IW2 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SHDQ96IW2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.64■□□□□ 0.1
SHDQ96IW2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHDQ96IW2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.64■□□□□ 0.09
SHDQ96IW2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHDQ96IW2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHDQ96IW2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.64■□□□□ 0.09
SHDQ96IW2 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SHDQ96IW2 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.64■□□□□ 0.09
SHDQ96IW2 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SHDQ96IW2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.64■□□□□ 0.09
SHDQ96IW2 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms