Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 AC079178.1-201ENST00000420915 656 ntBASIC16.86■□□□□ 0.29
LRCH3Q96II8 OARD1-204ENST00000464633 717 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 KRT18P25-201ENST00000508931 1278 ntBASIC16.86■□□□□ 0.29
LRCH3Q96II8 AC005740.2-201ENST00000511085 419 ntBASIC16.86■□□□□ 0.29
LRCH3Q96II8 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LRCH3Q96II8 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.86■□□□□ 0.29
LRCH3Q96II8 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 AC011742.3-201ENST00000439053 820 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 AC026410.3-201ENST00000514280 936 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 AC012044.1-201ENST00000603431 297 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 AL353770.1-201ENST00000614915 403 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 AC244157.2-201ENST00000616239 1006 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 PLS3-210ENST00000626746 216 ntTSL 4 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 AC100757.4-201ENST00000626934 759 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 AC016396.2-201ENST00000562575 1417 ntBASIC16.85■□□□□ 0.29
LRCH3Q96II8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
LRCH3Q96II8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
LRCH3Q96II8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 AC005915.1-201ENST00000624912 2018 ntBASIC16.84■□□□□ 0.29
LRCH3Q96II8 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
LRCH3Q96II8 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LRCH3Q96II8 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.84■□□□□ 0.29
LRCH3Q96II8 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms