Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 AC104457.1-201ENST00000401024 814 ntBASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 AC092337.1-201ENST00000568699 1129 ntBASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 AC091951.1-201ENST00000512854 2465 ntBASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM5Q96HC4 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 KRT18P28-201ENST00000453838 1332 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ZBED1P1-201ENST00000502364 1930 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 TSSK5P-201ENST00000423978 907 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AC114501.2-201ENST00000439631 535 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AC009477.1-201ENST00000452936 217 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AC044860.1-202ENST00000559481 777 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AC000095.1-201ENST00000603208 874 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM5Q96HC4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 AL121723.1-201ENST00000445194 1519 ntBASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms