Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 AC004967.1-201ENST00000453589 447 ntBASIC16.6■□□□□ 0.25
TRIM11Q96F44 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 SLED1-202ENST00000512051 380 ntBASIC16.6■□□□□ 0.25
TRIM11Q96F44 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 AC069262.1-201ENST00000539058 672 ntBASIC16.6■□□□□ 0.25
TRIM11Q96F44 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRIM11Q96F44 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TRIM11Q96F44 MIR600HG-201ENST00000449175 5984 ntBASIC16.6■□□□□ 0.25
TRIM11Q96F44 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 AC134684.3-201ENST00000641758 218 ntBASIC16.59■□□□□ 0.25
TRIM11Q96F44 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 Z97205.2-201ENST00000564697 1639 ntBASIC16.59■□□□□ 0.25
TRIM11Q96F44 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TRIM11Q96F44 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRIM11Q96F44 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.58■□□□□ 0.25
TRIM11Q96F44 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM11Q96F44 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM11Q96F44 AC023024.2-201ENST00000623561 1993 ntBASIC16.58■□□□□ 0.25
TRIM11Q96F44 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
TRIM11Q96F44 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.58■□□□□ 0.25
TRIM11Q96F44 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM11Q96F44 TCAF2P1-201ENST00000291129 2421 ntBASIC16.58■□□□□ 0.25
TRIM11Q96F44 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM11Q96F44 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRIM11Q96F44 AL136379.1-201ENST00000623471 2642 ntBASIC16.58■□□□□ 0.25
TRIM11Q96F44 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TRIM11Q96F44 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 HLA-V-204ENST00000476601 1289 ntBASIC16.58■□□□□ 0.24
TRIM11Q96F44 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 1844.3 ms