Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM43Q96BQ3 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRIM43Q96BQ3 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRIM43Q96BQ3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AC019193.1-201ENST00000506678 823 ntBASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 MARK2P5-201ENST00000507649 634 ntBASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AC012044.1-201ENST00000603431 297 ntBASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AC011477.6-201ENST00000604980 1927 ntBASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
TRIM43Q96BQ3 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AL157791.1-201ENST00000553667 1699 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AL645937.2-201ENST00000396808 931 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC026316.1-201ENST00000398900 414 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AL136309.1-201ENST00000403917 691 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 PDIA3P2-201ENST00000428073 158 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC006335.1-201ENST00000445200 547 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 RN7SL181P-201ENST00000462921 277 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC116345.2-201ENST00000512837 523 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 PGAM1P5-201ENST00000548011 764 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC103691.2-201ENST00000618824 433 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC068587.8-201ENST00000641239 219 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC106886.4-201ENST00000623557 2502 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 AC022188.1-201ENST00000620960 1664 ntBASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRIM43Q96BQ3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 AC092171.3-201ENST00000610122 2651 ntBASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRIM43Q96BQ3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms