Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
HIPK4Q8NE63 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.05
HIPK4Q8NE63 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIPK4Q8NE63 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
HIPK4Q8NE63 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
HIPK4Q8NE63 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 AJ011931.1-201ENST00000618749 2492 ntBASIC15.33■□□□□ 0.04
HIPK4Q8NE63 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 AC108073.2-201ENST00000464002 357 ntBASIC15.33■□□□□ 0.04
HIPK4Q8NE63 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CLEC4GP1-201ENST00000596555 870 ntBASIC15.33■□□□□ 0.04
HIPK4Q8NE63 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
HIPK4Q8NE63 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 RNU1-129P-201ENST00000384064 167 ntBASIC15.32■□□□□ 0.04
HIPK4Q8NE63 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 FAM185BP-201ENST00000443595 716 ntBASIC15.32■□□□□ 0.04
HIPK4Q8NE63 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 OR7E47P-204ENST00000575924 449 ntBASIC15.32■□□□□ 0.04
HIPK4Q8NE63 MIR3909-201ENST00000579518 119 ntBASIC15.32■□□□□ 0.04
HIPK4Q8NE63 U1.21-201ENST00000580816 167 ntBASIC15.32■□□□□ 0.04
HIPK4Q8NE63 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 ACTL9-202ENST00000612068 1252 ntBASIC15.32■□□□□ 0.04
HIPK4Q8NE63 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
HIPK4Q8NE63 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 AC107918.4-201ENST00000641966 3141 ntBASIC15.31■□□□□ 0.04
HIPK4Q8NE63 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
HIPK4Q8NE63 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms