Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 AC105917.1-201ENST00000506637 2539 ntBASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 VDAC1P7-201ENST00000462417 847 ntBASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 CTBP2P3-201ENST00000585629 1255 ntBASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 AL358472.5-202ENST00000641448 1267 ntBASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TMBIM7P-203ENST00000641617 1718 ntBASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
TRAM1L1Q8N609 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 AC098614.1-201ENST00000368528 745 ntBASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 AC134915.1-201ENST00000426461 574 ntBASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 AC026410.3-201ENST00000514280 936 ntBASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 INTS4P2-202ENST00000614726 2019 ntBASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 DRD5P1-201ENST00000456605 1438 ntBASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TRAM1L1Q8N609 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TRAM1L1Q8N609 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms