Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 CROCCP4-201ENST00000457096 498 ntBASIC17.05■□□□□ 0.32
VPS52Q8N1B4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 AC119751.2-201ENST00000504529 210 ntBASIC17.05■□□□□ 0.32
VPS52Q8N1B4 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 AP005482.1-201ENST00000563722 1273 ntBASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 MIR6775-201ENST00000617557 69 ntBASIC17.05■□□□□ 0.32
VPS52Q8N1B4 COX11-210ENST00000639671 696 ntBASIC17.05■□□□□ 0.32
VPS52Q8N1B4 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
VPS52Q8N1B4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 PAUPAR-201ENST00000630360 2965 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AZGP1P1-201ENST00000411909 902 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 KRT223P-202ENST00000449164 1292 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 POU5F1P6-201ENST00000466990 990 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 SNX29P1-201ENST00000548357 1007 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AC036164.1-201ENST00000570544 333 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AC133552.6-201ENST00000613406 534 ntBASIC17.04■□□□□ 0.32
VPS52Q8N1B4 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VPS52Q8N1B4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms