Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AC138696.2-201ENST00000607376 223 ntBASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
COL27A1Q8IZC6 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 PRKXP1-201ENST00000561423 1122 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AL162426.1-201ENST00000624141 743 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AC100757.4-201ENST00000626934 759 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 CYP2T1P-202ENST00000641596 2535 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 FZD10-202ENST00000539839 3282 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AL138725.1-201ENST00000407347 1314 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 FKBP4P6-201ENST00000457486 1332 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 IGF1-203ENST00000392904 761 ntTSL 5 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 RPL17P11-201ENST00000417593 544 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 AC069218.1-201ENST00000435269 762 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 MEG3_2.1-201ENST00000611456 105 ntBASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
COL27A1Q8IZC6 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 REXO1L5P-201ENST00000622260 2098 ntBASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AC005740.2-201ENST00000511085 419 ntBASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 CU633904.3-201ENST00000624042 1029 ntBASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 AL805961.1-203ENST00000641078 1258 ntBASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
COL27A1Q8IZC6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms