Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 MIR1202-201ENST00000408529 83 ntBASIC16.91■□□□□ 0.3
HERC6Q8IVU3 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 RERG-205ENST00000537647 935 ntTSL 2 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 EEF1DP1-201ENST00000585891 896 ntBASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AL162727.3-201ENST00000635661 2787 ntBASIC16.91■□□□□ 0.3
HERC6Q8IVU3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 AL138709.1-201ENST00000614840 1693 ntBASIC16.91■□□□□ 0.3
HERC6Q8IVU3 DOC2GP-204ENST00000639052 2548 ntBASIC16.91■□□□□ 0.3
HERC6Q8IVU3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HERC6Q8IVU3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 UPF3AP2-201ENST00000457924 1132 ntBASIC16.9■□□□□ 0.3
HERC6Q8IVU3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 HIST2H2BC-201ENST00000498492 580 ntBASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AC015818.8-201ENST00000587907 1519 ntBASIC16.9■□□□□ 0.3
HERC6Q8IVU3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HERC6Q8IVU3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
HERC6Q8IVU3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 RNA5SP486-201ENST00000515961 83 ntBASIC16.89■□□□□ 0.29
HERC6Q8IVU3 AC015910.1-201ENST00000579400 975 ntBASIC16.89■□□□□ 0.29
HERC6Q8IVU3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 AC097359.3-201ENST00000603982 1210 ntBASIC16.89■□□□□ 0.29
HERC6Q8IVU3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HERC6Q8IVU3 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms