Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC023141.5-201ENST00000458585 616 ntBASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC097359.3-201ENST00000603982 1210 ntBASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 AC009093.7-201ENST00000623853 1223 ntBASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00346Q8IVM7 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 MIR4453-201ENST00000584019 89 ntBASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00346Q8IVM7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 RN7SL828P-201ENST00000607615 303 ntBASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
LINC00346Q8IVM7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms