Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
VRK2Q86Y07 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.52□□□□□ -0.08
VRK2Q86Y07 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
VRK2Q86Y07 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.52□□□□□ -0.08
VRK2Q86Y07 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 AC254562.1-201ENST00000417586 456 ntBASIC14.52□□□□□ -0.09
VRK2Q86Y07 CNN2P11-201ENST00000429351 262 ntBASIC14.52□□□□□ -0.09
VRK2Q86Y07 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 AL079307.3-201ENST00000556114 283 ntBASIC14.52□□□□□ -0.09
VRK2Q86Y07 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 AC134684.3-201ENST00000641758 218 ntBASIC14.52□□□□□ -0.09
VRK2Q86Y07 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
VRK2Q86Y07 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
VRK2Q86Y07 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 SPDYE7P-202ENST00000420373 878 ntBASIC14.51□□□□□ -0.09
VRK2Q86Y07 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 TARDBPP1-201ENST00000442013 1203 ntBASIC14.51□□□□□ -0.09
VRK2Q86Y07 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AC027612.4-201ENST00000605371 583 ntBASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL589739.1-201ENST00000607720 493 ntBASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL596442.2-201ENST00000610240 980 ntBASIC14.51□□□□□ -0.09
VRK2Q86Y07 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
VRK2Q86Y07 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
VRK2Q86Y07 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms