Protein–RNA interactions for Protein: Q86XW9

NME9, Thioredoxin domain-containing protein 6, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME9Q86XW9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
NME9Q86XW9 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NME9Q86XW9 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
NME9Q86XW9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC20.89■□□□□ 0.93
NME9Q86XW9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.89■□□□□ 0.93
NME9Q86XW9 HOMER2P2-201ENST00000451621 847 ntBASIC20.89■□□□□ 0.93
NME9Q86XW9 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NME9Q86XW9 RN7SL48P-201ENST00000579283 293 ntBASIC20.89■□□□□ 0.93
NME9Q86XW9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.89■□□□□ 0.93
NME9Q86XW9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NME9Q86XW9 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NME9Q86XW9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC20.89■□□□□ 0.93
NME9Q86XW9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
NME9Q86XW9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NME9Q86XW9 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC20.88■□□□□ 0.93
NME9Q86XW9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NME9Q86XW9 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC20.88■□□□□ 0.93
NME9Q86XW9 CD8B2-202ENST00000417670 633 ntBASIC20.88■□□□□ 0.93
NME9Q86XW9 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.88■□□□□ 0.93
NME9Q86XW9 AP006547.1-201ENST00000563435 692 ntBASIC20.88■□□□□ 0.93
NME9Q86XW9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.88■□□□□ 0.93
NME9Q86XW9 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC20.88■□□□□ 0.93
NME9Q86XW9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.88■□□□□ 0.93
NME9Q86XW9 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NME9Q86XW9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC20.88■□□□□ 0.93
NME9Q86XW9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NME9Q86XW9 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NME9Q86XW9 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.88■□□□□ 0.93
NME9Q86XW9 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NME9Q86XW9 AC020916.1-201ENST00000587762 1774 ntBASIC20.87■□□□□ 0.93
NME9Q86XW9 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC20.87■□□□□ 0.93
NME9Q86XW9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NME9Q86XW9 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 CNN2P10-201ENST00000443067 918 ntBASIC20.87■□□□□ 0.93
NME9Q86XW9 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC20.87■□□□□ 0.93
NME9Q86XW9 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC20.87■□□□□ 0.93
NME9Q86XW9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC20.87■□□□□ 0.93
NME9Q86XW9 CYGB-203ENST00000589145 788 ntTSL 3 BASIC20.87■□□□□ 0.93
NME9Q86XW9 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 AL096828.3-201ENST00000615354 462 ntBASIC20.87■□□□□ 0.93
NME9Q86XW9 AL008638.5-201ENST00000623814 1298 ntBASIC20.87■□□□□ 0.93
NME9Q86XW9 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 AC018735.1-201ENST00000437208 1502 ntBASIC20.87■□□□□ 0.93
NME9Q86XW9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NME9Q86XW9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.87■□□□□ 0.93
NME9Q86XW9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NME9Q86XW9 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms