Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL022328.1-201ENST00000610050 478 ntBASIC17.44■□□□□ 0.38
TRIM50Q86XT4 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.44■□□□□ 0.38
TRIM50Q86XT4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 AC093433.1-201ENST00000458048 571 ntBASIC17.43■□□□□ 0.38
TRIM50Q86XT4 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRIM50Q86XT4 PKD1P5-201ENST00000532415 10291 ntBASIC17.43■□□□□ 0.38
TRIM50Q86XT4 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 AC005229.1-201ENST00000392885 409 ntBASIC17.42■□□□□ 0.38
TRIM50Q86XT4 AL133267.1-201ENST00000398220 340 ntBASIC17.42■□□□□ 0.38
TRIM50Q86XT4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 AC112504.1-201ENST00000623415 1841 ntBASIC17.42■□□□□ 0.38
TRIM50Q86XT4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRIM50Q86XT4 REXO1L6P-201ENST00000603433 1515 ntBASIC17.42■□□□□ 0.38
TRIM50Q86XT4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AC092933.1-201ENST00000393644 945 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 BAATP1-201ENST00000412284 1225 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AC099336.1-201ENST00000417053 1171 ntBASIC17.41■□□□□ 0.38
TRIM50Q86XT4 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms