Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRTM4Q86VH4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 CU639417.3-201ENST00000624240 1404 ntBASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 RN7SL752P-201ENST00000463779 287 ntBASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 AC011495.1-201ENST00000498085 584 ntBASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 WFDC1-204ENST00000613603 549 ntBASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.34■□□□□ 0.05
LRRTM4Q86VH4 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRTM4Q86VH4 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LRRTM4Q86VH4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.33■□□□□ 0.05
LRRTM4Q86VH4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LRRTM4Q86VH4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 INTS4P2-202ENST00000614726 2019 ntBASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 COX5BP8-201ENST00000416911 349 ntBASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 NME2P1-201ENST00000426182 414 ntBASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 AC134915.1-201ENST00000426461 574 ntBASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
LRRTM4Q86VH4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms