Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 AL512361.1-201ENST00000554200 418 ntBASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 AC051619.7-201ENST00000568314 623 ntBASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.57■□□□□ 0.08
ZNF549Q6P9A3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 CNN2P2-201ENST00000443536 909 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 CNN2P3-201ENST00000450201 906 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC004449.1-201ENST00000564240 433 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC015911.4-201ENST00000588022 1070 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AL136317.3-201ENST00000618497 906 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 MIR6069-201ENST00000620069 79 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC093028.1-201ENST00000622998 982 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC079781.4-201ENST00000641908 219 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 MST1L-201ENST00000442552 2185 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 AC126755.1-201ENST00000525846 6405 ntBASIC15.56■□□□□ 0.08
ZNF549Q6P9A3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF549Q6P9A3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF549Q6P9A3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ZNF549Q6P9A3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
ZNF549Q6P9A3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms