Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AC026150.2-201ENST00000564693 1156 ntBASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AC005829.1-201ENST00000570002 483 ntBASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 AL035456.1-201ENST00000456064 1369 ntBASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDKAL1Q5VV42 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 Z97205.2-201ENST00000564697 1639 ntBASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 KRT18P64-201ENST00000434946 1219 ntBASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 RBPMS2P1-201ENST00000437762 623 ntBASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 SLED1-202ENST00000512051 380 ntBASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDKAL1Q5VV42 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 AC104457.1-201ENST00000401024 814 ntBASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 AL079307.3-201ENST00000556114 283 ntBASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC17.1■□□□□ 0.33
CDKAL1Q5VV42 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDKAL1Q5VV42 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC17.09■□□□□ 0.33
CDKAL1Q5VV42 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms