Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AL627223.1-201ENST00000416693 442 ntBASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AL353705.2-201ENST00000428243 662 ntBASIC15.31■□□□□ 0.04
SGO1Q5FBB7 RBPMS2P1-201ENST00000437762 623 ntBASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.31■□□□□ 0.04
SGO1Q5FBB7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SGO1Q5FBB7 C18orf15-201ENST00000623680 2534 ntBASIC15.31■□□□□ 0.04
SGO1Q5FBB7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 BX842568.4-201ENST00000421222 227 ntBASIC15.3■□□□□ 0.04
SGO1Q5FBB7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 AC018529.1-201ENST00000613063 361 ntBASIC15.3■□□□□ 0.04
SGO1Q5FBB7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SGO1Q5FBB7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.29■□□□□ 0.04
SGO1Q5FBB7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SGO1Q5FBB7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SGO1Q5FBB7 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SGO1Q5FBB7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms