Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL158212.4-201ENST00000624062 1286 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AC138969.3-201ENST00000546612 1459 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AC138932.2-201ENST00000548268 1459 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 AC126755.4-201ENST00000549796 1459 ntBASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.48■□□□□ 0.23
PTPN20Q4JDL3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 TIMM17BP1-201ENST00000545713 516 ntBASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 AC023157.3-201ENST00000619086 2088 ntBASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.47■□□□□ 0.23
PTPN20Q4JDL3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 AC091951.1-201ENST00000512854 2465 ntBASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PTPN20Q4JDL3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.46■□□□□ 0.22
PTPN20Q4JDL3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MST1L-201ENST00000442552 2185 ntBASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 AC126365.1-201ENST00000578585 1514 ntBASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PTPN20Q4JDL3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms