Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 AC112191.1-201ENST00000523689 701 ntBASIC13.96□□□□□ -0.17
ODF4Q2M2E3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 PDPK2P-202ENST00000562415 1191 ntBASIC13.96□□□□□ -0.17
ODF4Q2M2E3 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 SPTSSB-204ENST00000617024 1292 ntBASIC13.96□□□□□ -0.17
ODF4Q2M2E3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 AC092865.6-201ENST00000642101 219 ntBASIC13.96□□□□□ -0.17
ODF4Q2M2E3 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
ODF4Q2M2E3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.96□□□□□ -0.18
ODF4Q2M2E3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC098859.1-201ENST00000502915 1238 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 RNA5SP410-201ENST00000516285 106 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC145285.3-201ENST00000564603 959 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 RARRES2P8-201ENST00000566335 367 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC099522.2-201ENST00000607001 744 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AL691432.1-201ENST00000596308 1422 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC067750.1-201ENST00000608826 6545 ntBASIC13.95□□□□□ -0.18
ODF4Q2M2E3 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ODF4Q2M2E3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 AC127383.1-201ENST00000444697 1800 ntBASIC13.94□□□□□ -0.18
ODF4Q2M2E3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ODF4Q2M2E3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms