Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.22■□□□□ 0.35
NFX1Q12986 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 ENPP7P5-201ENST00000541031 1031 ntBASIC17.22■□□□□ 0.35
NFX1Q12986 PTP4A1P2-201ENST00000546033 454 ntBASIC17.22■□□□□ 0.35
NFX1Q12986 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.22■□□□□ 0.35
NFX1Q12986 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.22■□□□□ 0.35
NFX1Q12986 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
NFX1Q12986 PAUPAR-201ENST00000630360 2965 ntBASIC17.22■□□□□ 0.35
NFX1Q12986 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.22■□□□□ 0.35
NFX1Q12986 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NFX1Q12986 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.22■□□□□ 0.35
NFX1Q12986 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.22■□□□□ 0.35
NFX1Q12986 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.22■□□□□ 0.35
NFX1Q12986 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NFX1Q12986 PDIA3P1-201ENST00000471856 1510 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
NFX1Q12986 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.21■□□□□ 0.35
NFX1Q12986 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.21■□□□□ 0.35
NFX1Q12986 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.21■□□□□ 0.35
NFX1Q12986 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.21■□□□□ 0.35
NFX1Q12986 NFIC-211ENST00000641145 8399 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.21■□□□□ 0.35
NFX1Q12986 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NFX1Q12986 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 BNIP3P42-201ENST00000454982 569 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 CTBP2P5-201ENST00000454986 1264 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.21■□□□□ 0.35
NFX1Q12986 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.21■□□□□ 0.35
NFX1Q12986 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.21■□□□□ 0.35
NFX1Q12986 AC120045.2-201ENST00000567334 178 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 AC124283.3-201ENST00000570869 594 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.21■□□□□ 0.35
NFX1Q12986 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC17.21■□□□□ 0.35
NFX1Q12986 BNIP3P29-201ENST00000598302 571 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 AC011447.5-201ENST00000616168 564 ntBASIC17.21■□□□□ 0.35
NFX1Q12986 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.21■□□□□ 0.35
NFX1Q12986 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.21■□□□□ 0.35
NFX1Q12986 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
NFX1Q12986 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.21■□□□□ 0.35
NFX1Q12986 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
NFX1Q12986 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFX1Q12986 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
NFX1Q12986 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
NFX1Q12986 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC17.2■□□□□ 0.34
NFX1Q12986 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.2■□□□□ 0.34
NFX1Q12986 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 AL139384.1-201ENST00000612143 3047 ntBASIC17.2■□□□□ 0.34
NFX1Q12986 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.2■□□□□ 0.34
NFX1Q12986 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NFX1Q12986 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms