Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40BQ12829 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB40BQ12829 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
RAB40BQ12829 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
RAB40BQ12829 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
RAB40BQ12829 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
RAB40BQ12829 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.08□□□□□ -0.16
RAB40BQ12829 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.08□□□□□ -0.16
RAB40BQ12829 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 ACE3P-201ENST00000423435 1973 ntBASIC14.07□□□□□ -0.16
RAB40BQ12829 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.07□□□□□ -0.16
RAB40BQ12829 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 AL136982.4-201ENST00000437689 1740 ntBASIC14.07□□□□□ -0.16
RAB40BQ12829 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40BQ12829 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40BQ12829 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.07□□□□□ -0.16
RAB40BQ12829 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40BQ12829 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.07□□□□□ -0.16
RAB40BQ12829 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.07□□□□□ -0.16
RAB40BQ12829 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
RAB40BQ12829 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
RAB40BQ12829 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.06□□□□□ -0.16
RAB40BQ12829 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 CICP4-201ENST00000447359 2812 ntBASIC14.06□□□□□ -0.16
RAB40BQ12829 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40BQ12829 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 AC009947.1-201ENST00000444350 727 ntBASIC14.06□□□□□ -0.16
RAB40BQ12829 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.06□□□□□ -0.16
RAB40BQ12829 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40BQ12829 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.06□□□□□ -0.16
RAB40BQ12829 AL121912.1-201ENST00000603683 238 ntBASIC14.06□□□□□ -0.16
RAB40BQ12829 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.06□□□□□ -0.16
RAB40BQ12829 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.06□□□□□ -0.16
RAB40BQ12829 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
RAB40BQ12829 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms