Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SSBP1Q04837 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SSBP1Q04837 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
SSBP1Q04837 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.3□□□□□ -0.28
SSBP1Q04837 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.3□□□□□ -0.28
SSBP1Q04837 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
SSBP1Q04837 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SSBP1Q04837 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.29□□□□□ -0.28
SSBP1Q04837 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 AC108073.2-201ENST00000464002 357 ntBASIC13.29□□□□□ -0.28
SSBP1Q04837 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.29□□□□□ -0.28
SSBP1Q04837 AC098859.1-201ENST00000502915 1238 ntBASIC13.29□□□□□ -0.28
SSBP1Q04837 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
SSBP1Q04837 OR7E14P-202ENST00000530490 1290 ntBASIC13.29□□□□□ -0.28
SSBP1Q04837 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 RN7SL850P-201ENST00000579959 291 ntBASIC13.29□□□□□ -0.28
SSBP1Q04837 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 AC004790.2-201ENST00000623588 572 ntBASIC13.29□□□□□ -0.28
SSBP1Q04837 AC005593.1-201ENST00000624894 515 ntBASIC13.29□□□□□ -0.28
SSBP1Q04837 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.29□□□□□ -0.28
SSBP1Q04837 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SSBP1Q04837 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SSBP1Q04837 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.28□□□□□ -0.28
SSBP1Q04837 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SSBP1Q04837 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 AC211429.1-201ENST00000415277 523 ntBASIC13.28□□□□□ -0.28
SSBP1Q04837 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 FOSL1P1-201ENST00000511041 816 ntBASIC13.28□□□□□ -0.28
SSBP1Q04837 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSBP1Q04837 AL356488.2-201ENST00000602755 427 ntBASIC13.28□□□□□ -0.28
SSBP1Q04837 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SSBP1Q04837 MBLAC2-202ENST00000514906 1936 ntBASIC13.28□□□□□ -0.28
SSBP1Q04837 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSBP1Q04837 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms