Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBXN1Q04323 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBXN1Q04323 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBXN1Q04323 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
UBXN1Q04323 AL607033.1-201ENST00000623900 1599 ntBASIC17.23■□□□□ 0.35
UBXN1Q04323 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
UBXN1Q04323 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.22■□□□□ 0.35
UBXN1Q04323 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.22■□□□□ 0.35
UBXN1Q04323 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
UBXN1Q04323 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
UBXN1Q04323 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBXN1Q04323 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
UBXN1Q04323 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.22■□□□□ 0.35
UBXN1Q04323 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
UBXN1Q04323 AZGP1P1-201ENST00000411909 902 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 MCCD1P2-201ENST00000423228 335 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 AL592309.1-201ENST00000443127 649 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 AC069335.1-201ENST00000489972 472 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.22■□□□□ 0.35
UBXN1Q04323 RARRES2P9-201ENST00000565168 469 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 AC040169.1-201ENST00000565382 521 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 AL121894.2-201ENST00000602977 491 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 AC007686.3-201ENST00000619017 3487 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
UBXN1Q04323 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 MYO15B-237ENST00000642007 4893 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
UBXN1Q04323 AC013726.1-201ENST00000563747 2285 ntBASIC17.22■□□□□ 0.35
UBXN1Q04323 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.21■□□□□ 0.35
UBXN1Q04323 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 AC084121.4-201ENST00000641598 221 ntBASIC17.21■□□□□ 0.35
UBXN1Q04323 AF228730.8-201ENST00000642140 221 ntBASIC17.21■□□□□ 0.35
UBXN1Q04323 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.21■□□□□ 0.35
UBXN1Q04323 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
UBXN1Q04323 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.21■□□□□ 0.35
UBXN1Q04323 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.21■□□□□ 0.34
UBXN1Q04323 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17.21■□□□□ 0.34
UBXN1Q04323 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.21■□□□□ 0.34
UBXN1Q04323 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
UBXN1Q04323 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.2■□□□□ 0.34
UBXN1Q04323 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
UBXN1Q04323 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.2■□□□□ 0.34
UBXN1Q04323 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 AC136604.1-201ENST00000418535 575 ntBASIC17.2■□□□□ 0.34
UBXN1Q04323 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 ACTG1P14-201ENST00000446382 1122 ntBASIC17.2■□□□□ 0.34
UBXN1Q04323 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.2■□□□□ 0.34
UBXN1Q04323 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UBXN1Q04323 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.2■□□□□ 0.34
UBXN1Q04323 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.2■□□□□ 0.34
UBXN1Q04323 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
UBXN1Q04323 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UBXN1Q04323 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.2■□□□□ 0.34
UBXN1Q04323 COCH-203ENST00000460581 2688 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms