Protein–RNA interactions for Protein: Q01850

CDR2, Cerebellar degeneration-related protein 2, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2Q01850 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDR2Q01850 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.73■□□□□ 0.27
CDR2Q01850 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
CDR2Q01850 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.73■□□□□ 0.27
CDR2Q01850 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.73■□□□□ 0.27
CDR2Q01850 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 AC025678.2-201ENST00000562061 970 ntBASIC16.73■□□□□ 0.27
CDR2Q01850 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.73■□□□□ 0.27
CDR2Q01850 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.73■□□□□ 0.27
CDR2Q01850 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 AC015911.4-201ENST00000588022 1070 ntBASIC16.73■□□□□ 0.27
CDR2Q01850 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 TEX28P1-201ENST00000613479 1221 ntBASIC16.73■□□□□ 0.27
CDR2Q01850 AL138828.2-201ENST00000615812 383 ntBASIC16.73■□□□□ 0.27
CDR2Q01850 TEX28P2-201ENST00000617764 1221 ntBASIC16.73■□□□□ 0.27
CDR2Q01850 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CDR2Q01850 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.73■□□□□ 0.27
CDR2Q01850 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.73■□□□□ 0.27
CDR2Q01850 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDR2Q01850 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CDR2Q01850 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 AC126755.1-201ENST00000525846 6405 ntBASIC16.72■□□□□ 0.27
CDR2Q01850 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CDR2Q01850 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.72■□□□□ 0.27
CDR2Q01850 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.72■□□□□ 0.27
CDR2Q01850 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.72■□□□□ 0.27
CDR2Q01850 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.72■□□□□ 0.27
CDR2Q01850 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 AP001160.2-201ENST00000596071 487 ntBASIC16.72■□□□□ 0.27
CDR2Q01850 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.72■□□□□ 0.27
CDR2Q01850 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.72■□□□□ 0.27
CDR2Q01850 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDR2Q01850 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms