Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 AC107890.1-201ENST00000422478 521 ntBASIC14.85□□□□□ -0.03
RAE1P78406 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.85□□□□□ -0.03
RAE1P78406 AC097493.3-201ENST00000509725 367 ntBASIC14.85□□□□□ -0.03
RAE1P78406 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.85□□□□□ -0.03
RAE1P78406 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.85□□□□□ -0.03
RAE1P78406 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.85□□□□□ -0.03
RAE1P78406 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.85□□□□□ -0.03
RAE1P78406 AC074044.1-201ENST00000609673 707 ntBASIC14.85□□□□□ -0.03
RAE1P78406 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RAE1P78406 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 AC087499.5-201ENST00000452760 1342 ntBASIC14.85□□□□□ -0.03
RAE1P78406 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RAE1P78406 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RAE1P78406 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.85□□□□□ -0.03
RAE1P78406 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 AL133267.1-201ENST00000398220 340 ntBASIC14.84□□□□□ -0.03
RAE1P78406 TOMM22P5-201ENST00000416399 439 ntBASIC14.84□□□□□ -0.03
RAE1P78406 TREML5P-201ENST00000421694 576 ntBASIC14.84□□□□□ -0.03
RAE1P78406 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.84□□□□□ -0.03
RAE1P78406 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.84□□□□□ -0.03
RAE1P78406 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAE1P78406 AC044860.1-202ENST00000559481 777 ntBASIC14.84□□□□□ -0.03
RAE1P78406 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.84□□□□□ -0.03
RAE1P78406 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.84□□□□□ -0.03
RAE1P78406 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.84□□□□□ -0.03
RAE1P78406 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.84□□□□□ -0.03
RAE1P78406 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
RAE1P78406 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAE1P78406 ZBED1P1-201ENST00000502364 1930 ntBASIC14.84□□□□□ -0.03
RAE1P78406 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
RAE1P78406 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.84□□□□□ -0.03
RAE1P78406 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAE1P78406 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAE1P78406 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAE1P78406 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
RAE1P78406 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.83□□□□□ -0.03
RAE1P78406 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAE1P78406 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
RAE1P78406 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.83□□□□□ -0.04
RAE1P78406 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.83□□□□□ -0.04
RAE1P78406 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.83□□□□□ -0.04
RAE1P78406 SDHAP3-202ENST00000515467 728 ntBASIC14.83□□□□□ -0.04
RAE1P78406 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.83□□□□□ -0.04
RAE1P78406 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 AL158211.3-201ENST00000607385 239 ntBASIC14.83□□□□□ -0.04
RAE1P78406 AC139530.3-201ENST00000620344 690 ntBASIC14.83□□□□□ -0.04
RAE1P78406 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
RAE1P78406 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.83□□□□□ -0.04
RAE1P78406 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.83□□□□□ -0.04
RAE1P78406 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
RAE1P78406 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
RAE1P78406 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.83□□□□□ -0.04
RAE1P78406 AC100757.3-201ENST00000622361 1406 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms