Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP46P62068 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP46P62068 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.51■□□□□ 0.23
USP46P62068 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 GK-202ENST00000378941 458 ntTSL 3 BASIC16.5■□□□□ 0.23
USP46P62068 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 TMEM14DP-201ENST00000422205 345 ntBASIC16.5■□□□□ 0.23
USP46P62068 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.5■□□□□ 0.23
USP46P62068 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 AC011495.1-201ENST00000498085 584 ntBASIC16.5■□□□□ 0.23
USP46P62068 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.5■□□□□ 0.23
USP46P62068 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.5■□□□□ 0.23
USP46P62068 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.5■□□□□ 0.23
USP46P62068 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 RPSAP52-203ENST00000622976 1023 ntBASIC16.5■□□□□ 0.23
USP46P62068 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 AL121723.1-201ENST00000445194 1519 ntBASIC16.5■□□□□ 0.23
USP46P62068 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.5■□□□□ 0.23
USP46P62068 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
USP46P62068 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP46P62068 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP46P62068 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP46P62068 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
USP46P62068 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP46P62068 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.49■□□□□ 0.23
USP46P62068 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.49■□□□□ 0.23
USP46P62068 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.49■□□□□ 0.23
USP46P62068 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.49■□□□□ 0.23
USP46P62068 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 BRI3BPP1-201ENST00000594224 787 ntBASIC16.49■□□□□ 0.23
USP46P62068 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.49■□□□□ 0.23
USP46P62068 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 AL033527.5-201ENST00000641382 801 ntBASIC16.49■□□□□ 0.23
USP46P62068 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.49■□□□□ 0.23
USP46P62068 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP46P62068 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms