Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 AL513523.2-202ENST00000427283 2040 ntBASIC16.2■□□□□ 0.18
PTPN5P54829 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.2■□□□□ 0.18
PTPN5P54829 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN5P54829 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN5P54829 AC008267.1-201ENST00000474858 1069 ntBASIC16.2■□□□□ 0.18
PTPN5P54829 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.2■□□□□ 0.18
PTPN5P54829 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 AC009486.1-201ENST00000569860 813 ntBASIC16.2■□□□□ 0.18
PTPN5P54829 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN5P54829 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PTPN5P54829 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.2■□□□□ 0.18
PTPN5P54829 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PTPN5P54829 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PTPN5P54829 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN5P54829 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 AC007969.1-201ENST00000433675 447 ntBASIC16.19■□□□□ 0.18
PTPN5P54829 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN5P54829 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN5P54829 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 KRT90P-201ENST00000549264 1064 ntBASIC16.19■□□□□ 0.18
PTPN5P54829 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.19■□□□□ 0.18
PTPN5P54829 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 AC025048.3-201ENST00000590609 569 ntBASIC16.19■□□□□ 0.18
PTPN5P54829 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 AL353726.2-201ENST00000623259 884 ntBASIC16.19■□□□□ 0.18
PTPN5P54829 HLA-C-210ENST00000640219 976 ntBASIC16.19■□□□□ 0.18
PTPN5P54829 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.19■□□□□ 0.18
PTPN5P54829 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PTPN5P54829 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PTPN5P54829 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.19■□□□□ 0.18
PTPN5P54829 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PTPN5P54829 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PTPN5P54829 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PTPN5P54829 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PTPN5P54829 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
PTPN5P54829 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms