Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC19.09■□□□□ 0.65
NUP98P52948 AC106872.11-201ENST00000605838 421 ntBASIC19.09■□□□□ 0.65
NUP98P52948 AL645939.5-201ENST00000606834 243 ntBASIC19.09■□□□□ 0.65
NUP98P52948 AC007663.3-201ENST00000609632 465 ntBASIC19.09■□□□□ 0.65
NUP98P52948 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP98P52948 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
NUP98P52948 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
NUP98P52948 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NUP98P52948 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP98P52948 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.09■□□□□ 0.65
NUP98P52948 AC022616.1-201ENST00000518688 554 ntBASIC19.09■□□□□ 0.65
NUP98P52948 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 AC138627.1-207ENST00000641560 1006 ntBASIC19.09■□□□□ 0.65
NUP98P52948 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
NUP98P52948 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.09■□□□□ 0.65
NUP98P52948 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
NUP98P52948 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC19.08■□□□□ 0.65
NUP98P52948 AP000593.2-201ENST00000542775 1433 ntBASIC19.08■□□□□ 0.65
NUP98P52948 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
NUP98P52948 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NUP98P52948 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
NUP98P52948 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP98P52948 REXO1L5P-201ENST00000622260 2098 ntBASIC19.08■□□□□ 0.65
NUP98P52948 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
NUP98P52948 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP98P52948 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NUP98P52948 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.08■□□□□ 0.64
NUP98P52948 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NUP98P52948 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.08■□□□□ 0.64
NUP98P52948 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
NUP98P52948 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP98P52948 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP98P52948 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP98P52948 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.08■□□□□ 0.64
NUP98P52948 KRT8P19-201ENST00000551916 1455 ntBASIC19.08■□□□□ 0.64
NUP98P52948 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
NUP98P52948 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC19.08■□□□□ 0.64
NUP98P52948 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NUP98P52948 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.08■□□□□ 0.64
NUP98P52948 AL118508.1-201ENST00000613502 2345 ntBASIC19.08■□□□□ 0.64
NUP98P52948 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 INE2-201ENST00000630399 1874 ntBASIC19.07■□□□□ 0.64
NUP98P52948 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
NUP98P52948 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC19.07■□□□□ 0.64
NUP98P52948 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC19.07■□□□□ 0.64
NUP98P52948 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC19.07■□□□□ 0.64
NUP98P52948 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
NUP98P52948 AC091544.8-201ENST00000619490 361 ntBASIC19.07■□□□□ 0.64
NUP98P52948 PCBP2-OT1-201ENST00000634357 590 ntBASIC19.07■□□□□ 0.64
NUP98P52948 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.07■□□□□ 0.64
NUP98P52948 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NUP98P52948 AC079328.2-201ENST00000561241 3354 ntBASIC19.07■□□□□ 0.64
NUP98P52948 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms