Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.37■□□□□ 0.21
MTHFRP42898 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.37■□□□□ 0.21
MTHFRP42898 HNRNPUP1-201ENST00000554987 333 ntBASIC16.37■□□□□ 0.21
MTHFRP42898 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.37■□□□□ 0.21
MTHFRP42898 AC138951.2-201ENST00000623455 1161 ntBASIC16.37■□□□□ 0.21
MTHFRP42898 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
MTHFRP42898 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
MTHFRP42898 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MTHFRP42898 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.36■□□□□ 0.21
MTHFRP42898 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.36■□□□□ 0.21
MTHFRP42898 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.36■□□□□ 0.21
MTHFRP42898 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.36■□□□□ 0.21
MTHFRP42898 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.36■□□□□ 0.21
MTHFRP42898 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MTHFRP42898 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 FAM197Y7-201ENST00000432892 766 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AC007969.1-201ENST00000433675 447 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AL591846.1-201ENST00000451736 433 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AKR7A2P1-201ENST00000460134 915 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
MTHFRP42898 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.36■□□□□ 0.21
MTHFRP42898 AC078819.1-201ENST00000547454 765 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AC012085.1-201ENST00000548270 765 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AC015910.1-201ENST00000579400 975 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.36■□□□□ 0.21
MTHFRP42898 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.36■□□□□ 0.21
MTHFRP42898 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.36■□□□□ 0.21
MTHFRP42898 AC107373.2-201ENST00000607735 490 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 AP005019.2-201ENST00000615104 511 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AC132938.4-201ENST00000623835 848 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.36■□□□□ 0.21
MTHFRP42898 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
MTHFRP42898 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 PCDHA1-201ENST00000378133 2726 ntBASIC16.36■□□□□ 0.21
MTHFRP42898 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.36■□□□□ 0.21
MTHFRP42898 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.36■□□□□ 0.21
MTHFRP42898 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MTHFRP42898 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 REXO1L1P-202ENST00000608646 1974 ntBASIC16.35■□□□□ 0.21
MTHFRP42898 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 AC004898.1-201ENST00000451057 766 ntBASIC16.35■□□□□ 0.21
MTHFRP42898 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 SCARNA20.5-201ENST00000516991 142 ntBASIC16.35■□□□□ 0.21
MTHFRP42898 FOS-206ENST00000555347 1280 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
MTHFRP42898 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms