Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
TNFSF9P41273 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 GAPDHP40-201ENST00000505218 1006 ntBASIC16.88■□□□□ 0.29
TNFSF9P41273 AC026410.3-201ENST00000514280 936 ntBASIC16.88■□□□□ 0.29
TNFSF9P41273 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.88■□□□□ 0.29
TNFSF9P41273 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.88■□□□□ 0.29
TNFSF9P41273 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.88■□□□□ 0.29
TNFSF9P41273 AC133539.2-201ENST00000604757 467 ntBASIC16.88■□□□□ 0.29
TNFSF9P41273 AC107373.2-201ENST00000607735 490 ntBASIC16.88■□□□□ 0.29
TNFSF9P41273 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.88■□□□□ 0.29
TNFSF9P41273 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TNFSF9P41273 AC105917.1-201ENST00000506637 2539 ntBASIC16.88■□□□□ 0.29
TNFSF9P41273 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TNFSF9P41273 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.88■□□□□ 0.29
TNFSF9P41273 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFSF9P41273 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFSF9P41273 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 TMEM14DP-201ENST00000422205 345 ntBASIC16.87■□□□□ 0.29
TNFSF9P41273 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.87■□□□□ 0.29
TNFSF9P41273 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFSF9P41273 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.87■□□□□ 0.29
TNFSF9P41273 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TNFSF9P41273 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TNFSF9P41273 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TNFSF9P41273 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TNFSF9P41273 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFSF9P41273 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFSF9P41273 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFSF9P41273 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.86■□□□□ 0.29
TNFSF9P41273 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 C1QBPP1-201ENST00000400117 770 ntBASIC16.86■□□□□ 0.29
TNFSF9P41273 AL512384.1-201ENST00000406683 331 ntBASIC16.86■□□□□ 0.29
TNFSF9P41273 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFSF9P41273 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFSF9P41273 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 CR383656.12-201ENST00000549567 513 ntBASIC16.86■□□□□ 0.29
TNFSF9P41273 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.86■□□□□ 0.29
TNFSF9P41273 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TNFSF9P41273 CICP6-201ENST00000457191 2729 ntBASIC16.86■□□□□ 0.29
TNFSF9P41273 SSR4P1-203ENST00000599569 2260 ntBASIC16.86■□□□□ 0.29
TNFSF9P41273 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.86■□□□□ 0.29
TNFSF9P41273 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms