Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 AL596087.1-201ENST00000400979 1969 ntBASIC14.41□□□□□ -0.1
RFC3P40938 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RFC3P40938 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.41□□□□□ -0.1
RFC3P40938 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RFC3P40938 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RFC3P40938 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
RFC3P40938 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 TTTY23B-201ENST00000442790 549 ntBASIC14.4□□□□□ -0.1
RFC3P40938 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 PHKG1P2-201ENST00000457537 863 ntBASIC14.4□□□□□ -0.1
RFC3P40938 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RFC3P40938 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RFC3P40938 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.4□□□□□ -0.1
RFC3P40938 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.4□□□□□ -0.1
RFC3P40938 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
RFC3P40938 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RFC3P40938 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.39□□□□□ -0.11
RFC3P40938 AC104640.1-201ENST00000562617 2109 ntBASIC14.39□□□□□ -0.11
RFC3P40938 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RFC3P40938 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RFC3P40938 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
RFC3P40938 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RFC3P40938 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms