Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.18■□□□□ 0.34
USP8P40818 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.18■□□□□ 0.34
USP8P40818 AC004987.2-201ENST00000395959 1148 ntBASIC17.18■□□□□ 0.34
USP8P40818 RPS8P6-201ENST00000426177 609 ntBASIC17.18■□□□□ 0.34
USP8P40818 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 AC026979.3-201ENST00000607315 403 ntBASIC17.18■□□□□ 0.34
USP8P40818 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 REXO1L1P-202ENST00000608646 1974 ntBASIC17.18■□□□□ 0.34
USP8P40818 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
USP8P40818 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.18■□□□□ 0.34
USP8P40818 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
USP8P40818 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
USP8P40818 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.17■□□□□ 0.34
USP8P40818 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.17■□□□□ 0.34
USP8P40818 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 AC126335.2-201ENST00000623362 4637 ntBASIC17.17■□□□□ 0.34
USP8P40818 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
USP8P40818 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
USP8P40818 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 KRT18P13-201ENST00000400056 1290 ntBASIC17.17■□□□□ 0.34
USP8P40818 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 AC073347.1-201ENST00000421633 2643 ntBASIC17.17■□□□□ 0.34
USP8P40818 AL353705.2-201ENST00000428243 662 ntBASIC17.17■□□□□ 0.34
USP8P40818 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.17■□□□□ 0.34
USP8P40818 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.17■□□□□ 0.34
USP8P40818 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.17■□□□□ 0.34
USP8P40818 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 SNHG9-202ENST00000564014 471 ntBASIC17.17■□□□□ 0.34
USP8P40818 CYP4F24P-201ENST00000586049 1580 ntBASIC17.17■□□□□ 0.34
USP8P40818 AC134684.3-201ENST00000641758 218 ntBASIC17.17■□□□□ 0.34
USP8P40818 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.17■□□□□ 0.34
USP8P40818 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.17■□□□□ 0.34
USP8P40818 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
USP8P40818 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
USP8P40818 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 CNN2P11-201ENST00000429351 262 ntBASIC17.16■□□□□ 0.34
USP8P40818 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
USP8P40818 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 AC018529.1-201ENST00000613063 361 ntBASIC17.16■□□□□ 0.34
USP8P40818 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
USP8P40818 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
USP8P40818 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms