Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.58■□□□□ 0.24
PCK1P35558 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCK1P35558 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCK1P35558 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
PCK1P35558 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCK1P35558 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 AC092127.1-201ENST00000567093 3455 ntBASIC16.57■□□□□ 0.24
PCK1P35558 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 AC090616.6-203ENST00000579186 1945 ntBASIC16.57■□□□□ 0.24
PCK1P35558 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 AC097376.2-205ENST00000610159 5334 ntBASIC16.57■□□□□ 0.24
PCK1P35558 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 KRT8P12-202ENST00000472924 1397 ntBASIC16.57■□□□□ 0.24
PCK1P35558 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
PCK1P35558 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.57■□□□□ 0.24
PCK1P35558 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PCK1P35558 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 HIST3H2BA-201ENST00000436555 524 ntBASIC16.57■□□□□ 0.24
PCK1P35558 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 HLA-J-203ENST00000494367 1087 ntBASIC16.57■□□□□ 0.24
PCK1P35558 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.57■□□□□ 0.24
PCK1P35558 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
PCK1P35558 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCK1P35558 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PCK1P35558 FAM45BP-202ENST00000592932 1624 ntBASIC16.56■□□□□ 0.24
PCK1P35558 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCK1P35558 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCK1P35558 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCK1P35558 AC136621.1-201ENST00000624017 2304 ntBASIC16.56■□□□□ 0.24
PCK1P35558 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.56■□□□□ 0.24
PCK1P35558 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.56■□□□□ 0.24
PCK1P35558 DNAJB3-202ENST00000449667 1266 ntBASIC16.56■□□□□ 0.24
PCK1P35558 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.56■□□□□ 0.24
PCK1P35558 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.56■□□□□ 0.24
PCK1P35558 AC069262.1-201ENST00000539058 672 ntBASIC16.56■□□□□ 0.24
PCK1P35558 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.56■□□□□ 0.24
PCK1P35558 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.56■□□□□ 0.24
PCK1P35558 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.56■□□□□ 0.24
PCK1P35558 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 TNRC18P2-201ENST00000417666 2714 ntBASIC16.56■□□□□ 0.24
PCK1P35558 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 AC087481.3-201ENST00000602886 1894 ntBASIC16.56■□□□□ 0.24
PCK1P35558 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 PPT1-215ENST00000641471 2368 ntBASIC16.56■□□□□ 0.24
PCK1P35558 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.56■□□□□ 0.24
PCK1P35558 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCK1P35558 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCK1P35558 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.55■□□□□ 0.24
PCK1P35558 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCK1P35558 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms