Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RORAP35398 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RORAP35398 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.92□□□□□ -0.02
RORAP35398 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RORAP35398 AL607033.1-201ENST00000623900 1599 ntBASIC14.91□□□□□ -0.02
RORAP35398 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 AC112492.5-201ENST00000421897 457 ntBASIC14.91□□□□□ -0.02
RORAP35398 ACA64.2-201ENST00000459014 129 ntBASIC14.91□□□□□ -0.02
RORAP35398 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.91□□□□□ -0.02
RORAP35398 KRT17P8-201ENST00000540749 863 ntBASIC14.91□□□□□ -0.02
RORAP35398 AL603832.2-201ENST00000566195 2125 ntBASIC14.91□□□□□ -0.02
RORAP35398 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.91□□□□□ -0.02
RORAP35398 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.91□□□□□ -0.02
RORAP35398 RPSAP52-203ENST00000622976 1023 ntBASIC14.91□□□□□ -0.02
RORAP35398 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.91□□□□□ -0.02
RORAP35398 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.91□□□□□ -0.02
RORAP35398 AC024909.3-201ENST00000611513 2257 ntBASIC14.91□□□□□ -0.02
RORAP35398 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RORAP35398 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.91□□□□□ -0.02
RORAP35398 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.91□□□□□ -0.02
RORAP35398 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RORAP35398 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.9□□□□□ -0.02
RORAP35398 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.9□□□□□ -0.02
RORAP35398 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.9□□□□□ -0.02
RORAP35398 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.9□□□□□ -0.02
RORAP35398 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.9□□□□□ -0.02
RORAP35398 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
RORAP35398 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RORAP35398 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RORAP35398 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms