Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
SLC6A4P31645 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A4P31645 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SLC6A4P31645 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC6A4P31645 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC6A4P31645 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A4P31645 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC6A4P31645 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.02■□□□□ 0.16
SLC6A4P31645 AC007389.4-201ENST00000454674 793 ntBASIC16.02■□□□□ 0.16
SLC6A4P31645 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC6A4P31645 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.02■□□□□ 0.16
SLC6A4P31645 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC6A4P31645 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC6A4P31645 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC6A4P31645 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SLC6A4P31645 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC6A4P31645 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.02■□□□□ 0.15
SLC6A4P31645 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A4P31645 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A4P31645 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.02■□□□□ 0.15
SLC6A4P31645 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A4P31645 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A4P31645 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SLC6A4P31645 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A4P31645 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A4P31645 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A4P31645 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A4P31645 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A4P31645 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A4P31645 CLUHP6-201ENST00000580789 941 ntBASIC16.01■□□□□ 0.15
SLC6A4P31645 AC008735.3-201ENST00000596646 500 ntBASIC16.01■□□□□ 0.15
SLC6A4P31645 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.01■□□□□ 0.15
SLC6A4P31645 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 AC005252.2-201ENST00000624630 1141 ntBASIC16.01■□□□□ 0.15
SLC6A4P31645 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SLC6A4P31645 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SLC6A4P31645 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SLC6A4P31645 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.01■□□□□ 0.15
SLC6A4P31645 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16■□□□□ 0.15
SLC6A4P31645 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 AC090616.6-203ENST00000579186 1945 ntBASIC16■□□□□ 0.15
SLC6A4P31645 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SLC6A4P31645 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16■□□□□ 0.15
SLC6A4P31645 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16■□□□□ 0.15
SLC6A4P31645 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 MIR5189-201ENST00000577370 114 ntBASIC16■□□□□ 0.15
SLC6A4P31645 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16■□□□□ 0.15
SLC6A4P31645 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16■□□□□ 0.15
SLC6A4P31645 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms