Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
NCK1P16333 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.88□□□□□ -0.03
NCK1P16333 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 AC097376.2-205ENST00000610159 5334 ntBASIC14.88□□□□□ -0.03
NCK1P16333 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NCK1P16333 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NCK1P16333 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.88□□□□□ -0.03
NCK1P16333 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 AL645939.2-201ENST00000427340 991 ntBASIC14.88□□□□□ -0.03
NCK1P16333 UNC93B6-202ENST00000528242 690 ntBASIC14.88□□□□□ -0.03
NCK1P16333 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.88□□□□□ -0.03
NCK1P16333 AC061975.2-201ENST00000581722 295 ntBASIC14.88□□□□□ -0.03
NCK1P16333 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 AL121912.1-201ENST00000603683 238 ntBASIC14.88□□□□□ -0.03
NCK1P16333 AC023141.13-201ENST00000604991 943 ntBASIC14.88□□□□□ -0.03
NCK1P16333 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NCK1P16333 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.88□□□□□ -0.03
NCK1P16333 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.88□□□□□ -0.03
NCK1P16333 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.88□□□□□ -0.03
NCK1P16333 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.88□□□□□ -0.03
NCK1P16333 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.88□□□□□ -0.03
NCK1P16333 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NCK1P16333 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NCK1P16333 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.87□□□□□ -0.03
NCK1P16333 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 AL136982.4-201ENST00000437689 1740 ntBASIC14.87□□□□□ -0.03
NCK1P16333 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.87□□□□□ -0.03
NCK1P16333 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.87□□□□□ -0.03
NCK1P16333 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.87□□□□□ -0.03
NCK1P16333 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.87□□□□□ -0.03
NCK1P16333 MIR7706-201ENST00000613747 67 ntBASIC14.87□□□□□ -0.03
NCK1P16333 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NCK1P16333 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.87□□□□□ -0.03
NCK1P16333 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
NCK1P16333 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NCK1P16333 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.87□□□□□ -0.03
NCK1P16333 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCK1P16333 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NCK1P16333 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NCK1P16333 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.86□□□□□ -0.03
NCK1P16333 GRK6P1-201ENST00000400595 1711 ntBASIC14.86□□□□□ -0.03
NCK1P16333 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
NCK1P16333 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NCK1P16333 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms