Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.73■□□□□ 0.27
FAM228BP0C875 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.73■□□□□ 0.27
FAM228BP0C875 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.73■□□□□ 0.27
FAM228BP0C875 TARDBPP1-201ENST00000442013 1203 ntBASIC16.73■□□□□ 0.27
FAM228BP0C875 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.73■□□□□ 0.27
FAM228BP0C875 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.73■□□□□ 0.27
FAM228BP0C875 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.73■□□□□ 0.27
FAM228BP0C875 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.73■□□□□ 0.27
FAM228BP0C875 MIR4469-201ENST00000583919 79 ntBASIC16.73■□□□□ 0.27
FAM228BP0C875 RN7SL828P-201ENST00000607615 303 ntBASIC16.73■□□□□ 0.27
FAM228BP0C875 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
FAM228BP0C875 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC16.73■□□□□ 0.27
FAM228BP0C875 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
FAM228BP0C875 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
FAM228BP0C875 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
FAM228BP0C875 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.73■□□□□ 0.27
FAM228BP0C875 AC007292.2-201ENST00000593524 1812 ntBASIC16.73■□□□□ 0.27
FAM228BP0C875 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
FAM228BP0C875 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
FAM228BP0C875 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
FAM228BP0C875 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.72■□□□□ 0.27
FAM228BP0C875 RPL5P21-201ENST00000404620 815 ntBASIC16.72■□□□□ 0.27
FAM228BP0C875 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.72■□□□□ 0.27
FAM228BP0C875 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.72■□□□□ 0.27
FAM228BP0C875 RBPMS2P1-201ENST00000437762 623 ntBASIC16.72■□□□□ 0.27
FAM228BP0C875 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.72■□□□□ 0.27
FAM228BP0C875 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
FAM228BP0C875 AC026150.2-201ENST00000564693 1156 ntBASIC16.72■□□□□ 0.27
FAM228BP0C875 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.72■□□□□ 0.27
FAM228BP0C875 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.72■□□□□ 0.27
FAM228BP0C875 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.72■□□□□ 0.27
FAM228BP0C875 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
FAM228BP0C875 KRT8P12-202ENST00000472924 1397 ntBASIC16.72■□□□□ 0.27
FAM228BP0C875 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 AL390755.1-201ENST00000623716 2027 ntBASIC16.72■□□□□ 0.27
FAM228BP0C875 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
FAM228BP0C875 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.72■□□□□ 0.27
FAM228BP0C875 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.71■□□□□ 0.27
FAM228BP0C875 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
FAM228BP0C875 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.71■□□□□ 0.27
FAM228BP0C875 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FAM228BP0C875 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
FAM228BP0C875 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.71■□□□□ 0.27
FAM228BP0C875 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
FAM228BP0C875 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.71■□□□□ 0.27
FAM228BP0C875 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.71■□□□□ 0.27
FAM228BP0C875 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.71■□□□□ 0.27
FAM228BP0C875 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.71■□□□□ 0.27
FAM228BP0C875 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.71■□□□□ 0.27
FAM228BP0C875 AC007967.4-201ENST00000614700 386 ntBASIC16.71■□□□□ 0.27
FAM228BP0C875 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
FAM228BP0C875 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms