Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.04□□□□□ -0.16
SPARCP09486 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.04□□□□□ -0.16
SPARCP09486 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
SPARCP09486 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
SPARCP09486 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPARCP09486 AP3S2-216ENST00000617003 1561 ntBASIC14.04□□□□□ -0.16
SPARCP09486 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
SPARCP09486 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SPARCP09486 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SPARCP09486 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 AC138969.2-201ENST00000532739 9932 ntBASIC14.03□□□□□ -0.16
SPARCP09486 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SPARCP09486 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPARCP09486 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.03□□□□□ -0.16
SPARCP09486 AL022342.1-201ENST00000400363 863 ntBASIC14.03□□□□□ -0.16
SPARCP09486 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 AC004832.2-201ENST00000426397 482 ntBASIC14.03□□□□□ -0.16
SPARCP09486 HTR5BP-201ENST00000430851 1154 ntBASIC14.03□□□□□ -0.16
SPARCP09486 PHKG1P2-201ENST00000457537 863 ntBASIC14.03□□□□□ -0.16
SPARCP09486 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 ALG1L5P-201ENST00000482043 771 ntBASIC14.03□□□□□ -0.16
SPARCP09486 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.03□□□□□ -0.16
SPARCP09486 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.03□□□□□ -0.16
SPARCP09486 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.03□□□□□ -0.16
SPARCP09486 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.03□□□□□ -0.16
SPARCP09486 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SPARCP09486 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.03□□□□□ -0.16
SPARCP09486 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 AC112693.3-201ENST00000624819 1983 ntBASIC14.03□□□□□ -0.16
SPARCP09486 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SPARCP09486 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.03□□□□□ -0.16
SPARCP09486 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.03□□□□□ -0.16
SPARCP09486 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
SPARCP09486 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SPARCP09486 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SPARCP09486 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.16
SPARCP09486 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.02□□□□□ -0.16
SPARCP09486 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.02□□□□□ -0.16
SPARCP09486 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SPARCP09486 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
SPARCP09486 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
SPARCP09486 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
SPARCP09486 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPARCP09486 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPARCP09486 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPARCP09486 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPARCP09486 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SPARCP09486 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.02□□□□□ -0.17
SPARCP09486 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SPARCP09486 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.02□□□□□ -0.17
SPARCP09486 MKNK2P1-201ENST00000437526 628 ntBASIC14.02□□□□□ -0.17
SPARCP09486 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.02□□□□□ -0.17
SPARCP09486 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms