Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.32■□□□□ 0.04
WNT1P04628 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
WNT1P04628 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT1P04628 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
WNT1P04628 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 AC006001.1-201ENST00000325130 474 ntBASIC15.31■□□□□ 0.04
WNT1P04628 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
WNT1P04628 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 PFN1P12-201ENST00000455938 534 ntBASIC15.31■□□□□ 0.04
WNT1P04628 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT1P04628 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT1P04628 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT1P04628 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT1P04628 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT1P04628 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT1P04628 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.31■□□□□ 0.04
WNT1P04628 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.31■□□□□ 0.04
WNT1P04628 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT1P04628 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 AL138709.1-201ENST00000614840 1693 ntBASIC15.31■□□□□ 0.04
WNT1P04628 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.31■□□□□ 0.04
WNT1P04628 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
WNT1P04628 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
WNT1P04628 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.3■□□□□ 0.04
WNT1P04628 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.3■□□□□ 0.04
WNT1P04628 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.3■□□□□ 0.04
WNT1P04628 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.3■□□□□ 0.04
WNT1P04628 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.3■□□□□ 0.04
WNT1P04628 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.3■□□□□ 0.04
WNT1P04628 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.3■□□□□ 0.04
WNT1P04628 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.3■□□□□ 0.04
WNT1P04628 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.3■□□□□ 0.04
WNT1P04628 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.3■□□□□ 0.04
WNT1P04628 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
WNT1P04628 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
WNT1P04628 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.29■□□□□ 0.04
WNT1P04628 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
WNT1P04628 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
WNT1P04628 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT1P04628 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
WNT1P04628 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.29■□□□□ 0.04
WNT1P04628 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
WNT1P04628 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
WNT1P04628 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms