Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.96■□□□□ 0.47
COL2A1P02458 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.96■□□□□ 0.47
COL2A1P02458 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.96■□□□□ 0.47
COL2A1P02458 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
COL2A1P02458 DIO1-215ENST00000610607 796 ntTSL 5 BASIC17.96■□□□□ 0.47
COL2A1P02458 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
COL2A1P02458 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
COL2A1P02458 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.96■□□□□ 0.47
COL2A1P02458 AL360270.3-201ENST00000609118 1348 ntBASIC17.96■□□□□ 0.47
COL2A1P02458 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.96■□□□□ 0.47
COL2A1P02458 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
COL2A1P02458 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC17.96■□□□□ 0.46
COL2A1P02458 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
COL2A1P02458 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
COL2A1P02458 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL2A1P02458 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 RN7SKP175-201ENST00000408472 289 ntBASIC17.95■□□□□ 0.46
COL2A1P02458 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC17.95■□□□□ 0.46
COL2A1P02458 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.95■□□□□ 0.46
COL2A1P02458 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.95■□□□□ 0.46
COL2A1P02458 AC126915.1-201ENST00000522847 1038 ntBASIC17.95■□□□□ 0.46
COL2A1P02458 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.95■□□□□ 0.46
COL2A1P02458 AC020914.3-201ENST00000594712 304 ntBASIC17.95■□□□□ 0.46
COL2A1P02458 AP001002.3-201ENST00000623482 206 ntBASIC17.95■□□□□ 0.46
COL2A1P02458 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.95■□□□□ 0.46
COL2A1P02458 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL2A1P02458 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.95■□□□□ 0.46
COL2A1P02458 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.95■□□□□ 0.46
COL2A1P02458 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.95■□□□□ 0.46
COL2A1P02458 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.95■□□□□ 0.46
COL2A1P02458 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
COL2A1P02458 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL2A1P02458 AKR7A2P1-201ENST00000460134 915 ntBASIC17.95■□□□□ 0.46
COL2A1P02458 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL2A1P02458 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.95■□□□□ 0.46
COL2A1P02458 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.95■□□□□ 0.46
COL2A1P02458 AC244452.3-201ENST00000636814 210 ntBASIC17.95■□□□□ 0.46
COL2A1P02458 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL2A1P02458 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.94■□□□□ 0.46
COL2A1P02458 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.94■□□□□ 0.46
COL2A1P02458 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.94■□□□□ 0.46
COL2A1P02458 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.94■□□□□ 0.46
COL2A1P02458 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.94■□□□□ 0.46
COL2A1P02458 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.94■□□□□ 0.46
COL2A1P02458 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL2A1P02458 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.94■□□□□ 0.46
COL2A1P02458 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.94■□□□□ 0.46
COL2A1P02458 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.94■□□□□ 0.46
COL2A1P02458 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms