Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
IFNA1P01562 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.48□□□□□ -0.41
IFNA1P01562 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.48□□□□□ -0.41
IFNA1P01562 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
IFNA1P01562 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.47□□□□□ -0.41
IFNA1P01562 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 INTS4P1-201ENST00000438455 1935 ntBASIC12.47□□□□□ -0.41
IFNA1P01562 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.47□□□□□ -0.41
IFNA1P01562 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 SLC25A3P1-201ENST00000443844 931 ntBASIC12.47□□□□□ -0.41
IFNA1P01562 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.47□□□□□ -0.41
IFNA1P01562 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.47□□□□□ -0.41
IFNA1P01562 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.47□□□□□ -0.41
IFNA1P01562 AC073592.4-201ENST00000623827 446 ntBASIC12.47□□□□□ -0.41
IFNA1P01562 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
IFNA1P01562 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
IFNA1P01562 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
IFNA1P01562 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
IFNA1P01562 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
IFNA1P01562 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC12.46□□□□□ -0.41
IFNA1P01562 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.46□□□□□ -0.41
IFNA1P01562 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 WASH3P-207ENST00000560956 1394 ntBASIC12.46□□□□□ -0.41
IFNA1P01562 FO538757.1-201ENST00000623083 1397 ntBASIC12.46□□□□□ -0.41
IFNA1P01562 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
IFNA1P01562 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 TLE1-202ENST00000376484 666 ntTSL 3 BASIC12.46□□□□□ -0.41
IFNA1P01562 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
IFNA1P01562 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC12.46□□□□□ -0.41
IFNA1P01562 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
IFNA1P01562 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
IFNA1P01562 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
IFNA1P01562 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms