Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TIMM17BP1-201ENST00000545713 516 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.01□□□□□ -0.17
CNOT4O95628 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 AC004840.1-201ENST00000636359 365 ntBASIC14.01□□□□□ -0.17
CNOT4O95628 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CNOT4O95628 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CNOT4O95628 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.01□□□□□ -0.17
CNOT4O95628 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14□□□□□ -0.17
CNOT4O95628 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
CNOT4O95628 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CNOT4O95628 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14□□□□□ -0.17
CNOT4O95628 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14□□□□□ -0.17
CNOT4O95628 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 AL353779.1-201ENST00000434793 351 ntBASIC14□□□□□ -0.17
CNOT4O95628 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14□□□□□ -0.17
CNOT4O95628 ATP5G2P4-201ENST00000442175 420 ntBASIC14□□□□□ -0.17
CNOT4O95628 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14□□□□□ -0.17
CNOT4O95628 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 SRD5A3P1-201ENST00000603021 949 ntBASIC14□□□□□ -0.17
CNOT4O95628 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 AL109936.8-201ENST00000641772 604 ntBASIC14□□□□□ -0.17
CNOT4O95628 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CNOT4O95628 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14□□□□□ -0.17
CNOT4O95628 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14□□□□□ -0.17
CNOT4O95628 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 AC103702.1-201ENST00000548801 2630 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 AC069224.1-201ENST00000566372 1715 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.99□□□□□ -0.17
CNOT4O95628 PGR-209ENST00000617858 2816 ntTSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CNOT4O95628 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CNOT4O95628 AC087499.6-201ENST00000411576 835 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CNOT4O95628 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 DFFBP1-201ENST00000433250 979 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.99□□□□□ -0.17
CNOT4O95628 DOC2GP-202ENST00000514950 1163 ntBASIC13.99□□□□□ -0.17
CNOT4O95628 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms