Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDKL5O76039 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 AC241585.1-201ENST00000433527 519 ntBASIC18.24■□□□□ 0.51
CDKL5O76039 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKL5O76039 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.24■□□□□ 0.51
CDKL5O76039 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.24■□□□□ 0.51
CDKL5O76039 AL844908.2-201ENST00000609461 460 ntBASIC18.24■□□□□ 0.51
CDKL5O76039 AL590560.3-201ENST00000623350 461 ntBASIC18.24■□□□□ 0.51
CDKL5O76039 AL109936.8-201ENST00000641772 604 ntBASIC18.24■□□□□ 0.51
CDKL5O76039 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CDKL5O76039 AC084364.1-201ENST00000551967 1556 ntBASIC18.24■□□□□ 0.51
CDKL5O76039 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKL5O76039 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.24■□□□□ 0.51
CDKL5O76039 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.24■□□□□ 0.51
CDKL5O76039 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC18.24■□□□□ 0.51
CDKL5O76039 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDKL5O76039 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDKL5O76039 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.23■□□□□ 0.51
CDKL5O76039 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 KRT8P44-201ENST00000441609 1350 ntBASIC18.23■□□□□ 0.51
CDKL5O76039 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
CDKL5O76039 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDKL5O76039 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.23■□□□□ 0.51
CDKL5O76039 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.23■□□□□ 0.51
CDKL5O76039 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKL5O76039 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKL5O76039 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC18.23■□□□□ 0.51
CDKL5O76039 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDKL5O76039 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKL5O76039 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKL5O76039 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 AL133267.1-201ENST00000398220 340 ntBASIC18.22■□□□□ 0.51
CDKL5O76039 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.22■□□□□ 0.51
CDKL5O76039 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 DUX4L27-201ENST00000554796 1261 ntBASIC18.22■□□□□ 0.51
CDKL5O76039 AC015910.1-201ENST00000579400 975 ntBASIC18.22■□□□□ 0.51
CDKL5O76039 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.22■□□□□ 0.51
CDKL5O76039 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
CDKL5O76039 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.22■□□□□ 0.51
CDKL5O76039 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDKL5O76039 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDKL5O76039 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.22■□□□□ 0.51
CDKL5O76039 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CDKL5O76039 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms